Compare Injections

Create a scatterplot of injection correlations.

plot_compare_injection(
  mzroll_list,
  grouping_vars = "condition",
  peak_quant_var = "log2_abundance"
)

Arguments

mzroll_list	output of process_mzroll or process_mzroll_multi features: one row per unique analyte (defined by a unique groupId), samples: one row per unique sample (defined by a unique sampleId), measurements: one row per peak (samples x peakgroups)
grouping_vars	character vector of sample variables to use for grouping
peak_quant_var	variable to plot in comparison

Examples

plot_compare_injection(
  nplug_mzroll_augmented,
  grouping_vars = "condition",
  peak_quant_var = "log2_abundance"
)
#> 3 sample variables will be dropped since they
#> - vary for the same grouping_vars:
#> - samples_tbl_row, sample_name, replicate