calculate_pathway_enrichment_gsea.RdCalculate Pathway Enrichments using GSEA
calculate_pathway_enrichment_gsea(term_data, pathway_list, fdr_cutoff = 0.1)
| term_data | test statistics for a single term |
|---|---|
| pathway_list | a named list where names are pathways and entries are groupIds belonging to each pathway. |
| fdr_cutoff | minimum adjusted p-value to use for creating a the pathway summary plot. |
a list containing a summary plot for the term and tibble containing data and plots for all comparisons performed.